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「温室効果ガスN2Oを消す酵素、2つの系統の違いを見極める難しさ」の検索結果

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("nitrous oxide"[MeSH] OR N2O OR "nitrous oxide") AND (reductase OR enzyme OR "nitrous oxide reductase" OR nosZ) AND (clade OR phylogeny OR "phylogenetic diversity" OR lineage)

💡 N2O還元酵素nosZの2つの系統(clade I/II)の識別・分類に関する検索として構築

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  • Cell biology and molecular basis of denitrification.

    W G Zumft · Microbiology and molecular biology reviews : MMBR · 1997

    Denitrification is a distinct means of energy conservation, making use of N oxides as terminal electron acceptors for cellular bioenergetics under anaerobic, microaerophilic, and occasionally aerobic conditions. The process is an essential branch of the global N cycle, reversing dinitrogen fixation, and is associated with chemolithotrophic, phototrophic, diazotrophic, or organotrophic metabolism b…

    📄 PubMed で読む (PMID: 9409151)
  • Metagenomic Analyses of the Autotrophic Fe(II)-Oxidizing, Nitrate-Reducing Enrichment Culture KS.

    Shaomei He, Claudia Tominski, Andreas Kappler 他 · Applied and environmental microbiology · 2016

    Nitrate-dependent ferrous iron [Fe(II)] oxidation (NDFO) is a well-recognized chemolithotrophic pathway in anoxic sediments. The neutrophilic chemolithoautotrophic enrichment culture KS originally obtained from a freshwater sediment (K. L. Straub, M. Benz, B. Schink, and F. Widdel, Appl Environ Microbiol 62:1458-1460, 1996) has been used as a model system to study NDFO. However, the primary Fe(II)…

    📄 PubMed で読む (PMID: 26896135)
  • Denitrifying genes in bacterial and Archaeal genomes.

    Laurent Philippot · Biochimica et biophysica acta · 2002

    Denitrification, the reduction of nitrate or nitrite to nitrous oxide or dinitrogen, is the major mechanism by which fixed nitrogen returns to the atmosphere from soil and water. Although the denitrifying ability has been found in microorganisms belonging to numerous groups of bacteria and Archaea, the genes encoding the denitrifying reductases have been studied in only few species. Recent investi…

    📄 PubMed で読む (PMID: 12359326)
  • Novel taxa of Acidobacteriota implicated in seafloor sulfur cycling.

    Mathias Flieder, Joy Buongiorno, Craig W Herbold 他 · The ISME journal · 2021

    Acidobacteriota are widespread and often abundant in marine sediments, yet their metabolic and ecological properties are poorly understood. Here, we examined metabolisms and distributions of Acidobacteriota in marine sediments of Svalbard by functional predictions from metagenome-assembled genomes (MAGs), amplicon sequencing of 16S rRNA and dissimilatory sulfite reductase (dsrB) genes and transcri…

    📄 PubMed で読む (PMID: 33981000)
  • Loss in microbial diversity affects nitrogen cycling in soil.

    Laurent Philippot, Aymé Spor, Catherine Hénault 他 · The ISME journal · 2013

    Microbial communities have a central role in ecosystem processes by driving the Earth's biogeochemical cycles. However, the importance of microbial diversity for ecosystem functioning is still debated. Here, we experimentally manipulated the soil microbial community using a dilution approach to analyze the functional consequences of diversity loss. A trait-centered approach was embraced using the …

    📄 PubMed で読む (PMID: 23466702)
  • Consumption of N2O and other N-cycle intermediates by Gemmatimonas aurantiaca strain T-27.

    Joanne Chee-Sanford, David Tian, Robert Sanford 他 · Microbiology (Reading, England) · 2019

    Bacteria affiliated with the phylum Gemmatimonadetes are found in high abundance in many terrestrial and aquatic environments, yet little is known about their metabolic capabilities. Difficulty in their cultivation has prompted interest in identifying better growth conditions for metabolic studies, especially related to their ability to reduce N2O, a potent greenhouse gas. T-27 Gemmatimonas aurant…

    📄 PubMed で読む (PMID: 31580255)
  • Agricultural soil denitrifiers possess extensive nitrite reductase gene diversity.

    Sara Coyotzi, Andrew C Doxey, Ian D Clark 他 · Environmental microbiology · 2017

    Denitrification transforms nitrogen applied as fertilizer and emits N2 O, which is a potent greenhouse gas. Very little is known about the identities of abundant and active denitrifiers in agricultural soils. We coupled DNA stable-isotope probing (DNA-SIP) with flow-through reactors (FTRs) to detect active agricultural soil denitrifiers. The FTRs were incubated with nitrate and 13 C6 -glucose unde…

    📄 PubMed で読む (PMID: 27943515)
  • Identification and isolation of active N2O reducers in rice paddy soil.

    Satoshi Ishii, Hiroki Ohno, Masahiro Tsuboi 他 · The ISME journal · 2011

    Dissolved N(2)O is occasionally detected in surface and ground water in rice paddy fields, whereas little or no N(2)O is emitted to the atmosphere above these fields. This indicates the occurrence of N(2)O reduction in rice paddy fields; however, identity of the N(2)O reducers is largely unknown. In this study, we employed both culture-dependent and culture-independent approaches to identify N(2)O…

    📄 PubMed で読む (PMID: 21677691)
  • Altering N2O emissions by manipulating wheat root bacterial community.

    Alla Usyskin-Tonne, Yitzhak Hadar, Dror Minz 他 · Scientific reports · 2019

    Nitrous oxide (N2O) is a greenhouse gas and a potent ozone-depleting substance in the stratosphere. Agricultural soils are one of the main global sources of N2O emissions, particularly from cereal fields due to their high areal coverage. The aim of this study was to isolate N2O-reducing bacteria able to mitigate N2O emissions from the soil after inoculation. We isolated several bacteria from wheat…

    📄 PubMed で読む (PMID: 31110207)
  • Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers.

    Sharon Avrahami, Werner Liesack, Ralf Conrad 他 · Environmental microbiology · 2003

    We investigated the effect of temperature on the activity of soil ammonia oxidizers caused by changes in the availability of ammonium and in the microbial community structure. Both short (5 days) and long (6.5, 16 and 20 weeks) incubation of an agricultural soil resulted in a decrease in ammonium concentration that was more pronounced at temperatures between 10 and 25 degrees C than at either 4 de…

    📄 PubMed で読む (PMID: 12871236)